Clear IGV tracks loaded.
Collapse tracks in the IGV
Set the IGV genome.
Go to a specified region in IGV.
Load data into IGV via remote port call.
Create an IGV session file
Make a file snapshot of the current IGV screen.
Create a Socket Connection to IGV.
Sort an alignment track by the specified option.
Query NCBI SRA metadata within R or from a local SQLite database
Fasp file downloading using the ascp command line program
Fasp SRA data file downloading using the ascp command line program
Get column descriptions of SRAmetadb.sqlite
Create a new graphNEL object from an input entity matrix or data.frame
Download SRA fastq files from EBI ENA through ftp or fasp
Get SRA fastq file information and associated meta data from EBI ENA
Fulltext search SRA meta data using SQLite fts3 module
Download and unzip last version of SRAmetadb.sqlite.gz from the server
Download SRA data file through ftp or fasp
Get SRA data file information from NCBI SRA
List sra, sra-lite or fastq data file names associated with input SRA accessions
Cross-reference between GEO data types
Create a new graphNEL object of SRA accessios from SRA full text search
Start IGV from R with different amount maximum memory support